SAKTI LAB

Molecular Simulation Laboratory

Rigorous pKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations.


Journal article


A. W. Sakti, Y. Nishimura, H. Nakai
Journal of chemical theory and computation, 2018

Semantic Scholar DOI PubMed
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Cite

APA   Click to copy
Sakti, A. W., Nishimura, Y., & Nakai, H. (2018). Rigorous pKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations. Journal of Chemical Theory and Computation.


Chicago/Turabian   Click to copy
Sakti, A. W., Y. Nishimura, and H. Nakai. “Rigorous PKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations.” Journal of chemical theory and computation (2018).


MLA   Click to copy
Sakti, A. W., et al. “Rigorous PKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations.” Journal of Chemical Theory and Computation, 2018.


BibTeX   Click to copy

@article{a2018a,
  title = {Rigorous pKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations.},
  year = {2018},
  journal = {Journal of chemical theory and computation},
  author = {Sakti, A. W. and Nishimura, Y. and Nakai, H.}
}

Abstract

Predicting pKa values for different types of amine species with high accuracy and efficiency is of critical importance for the design of high performance and economical solvents in carbon capture and storage with aqueous amine solutions. In this study, we demonstrate that density-functional tight-binding-based metadynamics simulations are a promising approach to calculate the free energy difference between the protonated and neutral states of amines in aqueous solution with inexpensive computational cost. The calculated pKa values were in satisfactory agreement with the experimental values, the mean absolute deviation being only 0.09 pKa units for 34 amines commonly used in CO2 scrubbing. Such superior reproducibility and correlation compared to estimations by static quantum mechanical calculations highlight the significant effect of dynamical proton transfer processes in explicit solvent molecules for the improvement of the estimation accuracy.


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