SAKTI LAB

Molecular Simulation Laboratory

Publications


Quantum mechanical assessment on the optical properties of capsanthin conformers


Permono Adi Putro, A. Sakti, Faozan Ahmad, Hiromi Nakai, H. Alatas

Journal of Computational Chemistry, 2023


Effects of Nickel/Manganese Variation on Na2Mn3–zNizO7 for Sodium-Ion Battery Cathodes


Alvius Tinambunan, Faozan Ahmad, A. Sakti, Permono Adi Putro, Syafri, H. Alatas

Journal of Physical Chemistry C, 2022


Efficient Computational Chemistry Protocol Implementations for Chemical Research in Pandemic Situation


A. Sakti, N. Tanyela

Proceedings of the 1st International Conference on Contemporary Risk Studies, ICONIC-RS 2022, 31 March-1 April 2022, South Jakarta, DKI Jakarta, Indonesia, 2022


Effects of Salt Concentration on the Water and Ion Self-Diffusion Coefficients of a Model Aqueous Sodium-Ion Battery Electrolyte.


A. W. Sakti, S. T. Wahyudi, Faozan Ahmad, Noviyan Darmawan, H. Hardhienata, H. Alatas

The journal of physical chemistry. B, 2022


Zr-MOFs–catalyzed transfer hydrogenation of furfural to furfuryl alcohol: Unveiled performance of DUT-52


Karina Dania Agusta, Martina Fridayanti Miharja, A. W. Sakti, U. S. Arrozi, Laela Mukaromah, Aep Patah, Takayoshi Hara, Yessi Permana

Molecular Catalysis, 2022


Nitrile modulated-Ni(0) phosphines in trans-selective phenylpropenoids isomerization: An allylic route by a regular η1-N(end-on) or an alkyl route via a flipped-nitrile?


L. Saputra, Arifin, N. Gustini, N. Sinambela, Nova Pratiwi Indriyani, A. Sakti, U. S. Arrozi, M. Martoprawiro, Aep Patah, Yessi Permana

Molecular Catalysis, 2022


Cloning, heterologous expression, and characterization of a novel thioesterase from natural sample


Suharti, G. Mahardika, Raíssa, L. Dewi, H. Yohandini, M. P. Widhiastuty, Raden Aditya Wibawa Sakti, S. T. Wahyudi, Akhmaloka

Heliyon, 2021


Is Oxygen Diffusion Faster in Bulk CeO2 or on a (111)-CeO2 Surface? A Theoretical Study


Aditya Wibawa Sakti, Aditya Wibawa Sakti, Chien-Pin Chou, Yoshifumi Nishimura, Hiromi Nakai, Hiromi Nakai

Chemistry Letters, vol. 50(4), 2021 21, pp. 568-571


Confined water-mediated high proton conduction in hydrophobic channel of a synthetic nanotube


Ken‐ichi Otake, K. Otsubo, T. Komatsu, Shun Dekura, Jared M. Taylor, R. Ikeda, K. Sugimoto, A. Fujiwara, Chien‐Pin Chou, A. W. Sakti, Y. Nishimura, H. Nakai, H. Kitagawa

Nature Communications, 2020


Density-Functional Tight-Binding Study of Carbonaceous Species Diffusion on the (100)-γ-Al2O3 Surface.


Aditya W. Sakti, Aditya W. Sakti, Chien Pin Chou, Hiromi Nakai, Hiromi Nakai

ACS omega, vol. 5(12), 2020 Feb 18, pp. 6862-6871


Recent advances in quantum-mechanical molecular dynamics simulations of proton transfer mechanism in various water-based environments


Aditya W. Sakti, Yoshifumi Nishimura, Hiromi Nakai, Hiromi Nakai

Wiley Interdisciplinary Reviews: Computational Molecular Science, vol. 10(1), 2020 1


Cover Image, Volume 10, Issue 1


A. W. Sakti, Yoshifumi Nishimura, Hiromi Nakai

WIREs Computational Molecular Science, 2019


Development of Divide-and-Conquer Density-Functional Tight-Binding Method for Theoretical Research on Li-Ion Battery


Chien Pin Chou, Aditya Wibawa Sakti, Yoshifumi Nishimura, Hiromi Nakai, Hiromi Nakai

Chemical Record, vol. 19(4), 2019 Mar 1, pp. 746-757


Rigorous pKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations.


A. W. Sakti, Y. Nishimura, H. Nakai

Journal of chemical theory and computation, 2018


Development of Divide-and-Conquer Density-Functional Tight-Binding Method for Theoretical Research on Li-ion Battery.


Chien‐Pin Chou, A. W. Sakti, Y. Nishimura, H. Nakai

Chemical record, 2018


Density-Functional Tight-Binding Molecular Dynamics Simulations of Excess Proton Diffusion in Ice Ih, Ice Ic, Ice III, and Melted Ice VI Phases.


Aditya Wibawa Sakti, Yoshifumi Nishimura, Chien Pin Chou, Hiromi Nakai

Journal of Physical Chemistry A, vol. 122(1), 2018 11, pp. 33-40


Rigorous pKa Estimation of Amine Species Using Density-Functional Tight-Binding-Based Metadynamics Simulations


Aditya Wibawa Sakti, Yoshifumi Nishimura, Hiromi Nakai

Journal of Chemical Theory and Computation, vol. 14(1), 2018 9, pp. 351-356


Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water.


A. W. Sakti, Y. Nishimura, H. Nakai

The journal of physical chemistry. B, 2017


Divide-and-Conquer Density-Functional Tight-Binding Molecular Dynamics Study on the Formation of Carbamate Ions during CO2 Chemical Absorption in Aqueous Amine Solution


Aditya Wibawa Sakti, Yoshifumi Nishimura, Hiroshi Sato, Hiromi Nakai

Bulletin of the Chemical Society of Japan, vol. 90(11), 2017 Jul 10, pp. 1230-1235


Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water


Aditya Wibawa Sakti, Yoshifumi Nishimura, Hiromi Nakai

Journal of Physical Chemistry B, vol. 121(6), 2017 Jan 3, pp. 1362-1371


Divide-and-Conquer-Type Density-Functional Tight-Binding Molecular Dynamics Simulations of Proton Diffusion in a Bulk Water System


Hiromi Nakai, Aditya Wibawa Sakti, Yoshifumi Nishimura

Journal of Physical Chemistry B, vol. 120(1), 2016 5, pp. 217-221


STUDI SIFAT MEKANIK MOLEKUL PROTEIN MIRIP UBIQUITIN DENGAN METODE STEERED MOLECULAR DYNAMICS DAN ONIOM


Raden Aditya Wibawa Sakti, D. M. A. Martoprawiro, D. R. Hertadi

2014

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