SAKTI LAB

Molecular Simulation Laboratory

Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water.


Journal article


A. W. Sakti, Y. Nishimura, H. Nakai
The journal of physical chemistry. B, 2017

Semantic Scholar DOI PubMed
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APA   Click to copy
Sakti, A. W., Nishimura, Y., & Nakai, H. (2017). Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water. The Journal of Physical Chemistry. B.


Chicago/Turabian   Click to copy
Sakti, A. W., Y. Nishimura, and H. Nakai. “Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water.” The journal of physical chemistry. B (2017).


MLA   Click to copy
Sakti, A. W., et al. “Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water.” The Journal of Physical Chemistry. B, 2017.


BibTeX   Click to copy

@article{a2017a,
  title = {Divide-and-Conquer-Type Density-Functional Tight-Binding Simulations of Hydroxide Ion Diffusion in Bulk Water.},
  year = {2017},
  journal = {The journal of physical chemistry. B},
  author = {Sakti, A. W. and Nishimura, Y. and Nakai, H.}
}

Abstract

The diffusion of the hydroxide ion in bulk water was examined by linear-scaling divide-and-conquer density-functional tight-binding molecular dynamics (DC-DFTB-MD) simulations using three different-sized unit cells that contained 522, 1050, and 4999 water molecules as well as one hydroxide ion. The repulsive potential for the oxygen-oxygen pair was improved by iterative Boltzmann inversion, which adjusted the radial distribution function of DFTB-MD simulations to that of the reference density functional theory-MD one. The calculated diffusion coefficients and the Arrhenius diffusion barrier were in good agreement with experimental results. The results of the hydroxide ion coordination number distribution and potential of mean force analyses supported a dynamical hypercoordination diffusion mechanism.


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